bioCS

biology as computational science

Tuesday, June 14, 2016

My knitr LaTeX template: manuscript and supplement interleaved in one source file

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Most of the time between starting manuscript and having it accepted after peer-review is spent writing, re-writing and re-arranging content....
Tuesday, April 19, 2016

Display element ids for debugging Shiny apps

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My current Shiny project contains at least five tables and I constantly forget how they are called. So I whipped up a little bookmarklet th...
Friday, March 11, 2016

New R package: a dictionary with arbitrary keys and values

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Coming from Python, the absence of a real dictionary in R has annoyed me for quite some time. Now, I actually needed to use vectors as keys...
6 comments:
Tuesday, March 8, 2016

Avoiding unnecessary memory allocations in R

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As a rule, everything I discover in R has already been discussed by Hadley Wickham. In this case, he writes : The reason why the C++ functi...
9 comments:
Monday, August 24, 2015

Fitting with uncertainty using Bayesian inference

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This is a mirror of my post on RPubs. The RMarkdown source can be found here. In this toy example, we assume that we’ve independently mea...
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